The detailed information of tRNA gene sequence


Sequence ID>WENV170674996
Genome IDLCWZ01000401
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2113
End posion on genome 2039
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggatgaaaac
tRNA gene sequence 
GGCCCCGTAGTTCAACGGATAGAATAGAAGTTTCCTAAACTTTAGATACAGGTTCGATTC
CTGTCGGGGCTACAA
Downstream region at tRNA end position 
cgtaatcatt
Secondary structure (Cloverleaf model)
>WENV170674996	Arg	CCT
                   c      ACAA cgtaatcatt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      C A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    G + T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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