The detailed information of tRNA gene sequence


Sequence ID>WENV170675001
Genome IDLCWZ01000440
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 1812
End posion on genome 1738
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gccaacatac
tRNA gene sequence 
GCGGAAGTGGCTCAGAGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGAATC
CCGTCTTCCGCTCCA
Downstream region at tRNA end position 
tagcagttcc
Secondary structure (Cloverleaf model)
>WENV170675001	Gly	GCC
                   c      TCCA tagcagttcc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        G      + | | | |     G
      A     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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