The detailed information of tRNA gene sequence


Sequence ID>WENV170675003
Genome IDLCWZ01000476
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2141
End posion on genome 2065
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tggaattacT
tRNA gene sequence 
GGGCTTGTGGTCTAGCTGGTTATGACGTCGCCCTTACACGGCGAAGATCTCCGGTTCGAA
TCCGGACAGGCCCATCt
Downstream region at tRNA end position 
tctttttcga
Secondary structure (Cloverleaf model)
>WENV170675003	Val	TAC
                   T      ATCt tctttttcga
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     A G G C C     A
      C G A        G      | | | | |     G
    T       T C T G       T C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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