The detailed information of tRNA gene sequence


Sequence ID>WENV170675028
Genome IDLCWZ01001029
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2644
End posion on genome 2572
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gagcatttat
tRNA gene sequence 
GCTAGGGTAGGGTAGCTGGACATCCTATAGGACTGTGGATCCTTTGACCCGGGTTCGAGT
CCCGGCCCTGGCCtat
Downstream region at tRNA end position 
gcaaactatt
Secondary structure (Cloverleaf model)
>WENV170675028	His	GTG
                   t      Ctat gcaaactatt
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     G
    T       T G G G       C C G G G     C
    G         | | +                 T T
    G       T C C T
      A C A        A     TGAC
                    T   T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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