The detailed information of tRNA gene sequence


Sequence ID>WENV170675035
Genome IDLCWZ01001302
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 30
End posion on genome 104
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggatgaaaac
tRNA gene sequence 
GGCCCCGTAGTTCAACGGATAGAATAGAAGTTTCCTAAACTTTAGATACAGGTTCGATTC
CTGTCGGGGCTACGA
Downstream region at tRNA end position 
tctattaaca
Secondary structure (Cloverleaf model)
>WENV170675035	Arg	CCT
                   c      ACGA tctattaaca
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      C A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    G + T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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