The detailed information of tRNA gene sequence


Sequence ID>WENV170675037
Genome IDLCWZ01001365
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2593
End posion on genome 2519
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aggtaacatc
tRNA gene sequence 
AGGCCCGTAGCATAGCCAGGTGGTGCGCTCGGCTGATAACCGAGAGGTCATGCGTTCGAA
TCGCATCGGGCCCACtt
Downstream region at tRNA end position 
tcttttccag
Secondary structure (Cloverleaf model)
>WENV170675037	Ile	GAT
                   c      ACtt tcttttccag
                     A   C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      | | | | |     G
    C       T A C G       A T G C G     C
    A       + | | |                 T T
    G       G T G C
      G T G        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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