The detailed information of tRNA gene sequence


Sequence ID>WENV170675046
Genome IDLCWZ01001853
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 2244
End posion on genome 2169
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCGTCGGTTCGATC
CCGTCTGGCTCCACCA
Downstream region at tRNA end position 
ttgttgagtg
Secondary structure (Cloverleaf model)
>WENV170675046	Ala	TGC
                   n      ACCA ttgttgagtg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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