The detailed information of tRNA gene sequence


Sequence ID>WENV170675092
Genome IDLCWZ01005338
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 874
End posion on genome 948
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggtaatattt
tRNA gene sequence 
GGGCCCGTAGCATAGCCCGGTGGTGCGCTCGGCTGATAACCGAGAGGTCATGCGTTCGAA
TCGCATCGGGCCCACtc
Downstream region at tRNA end position 
ctgtttttca
Secondary structure (Cloverleaf model)
>WENV170675092	Ile	GAT
                   t      ACtc ctgtttttca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      | | | | |     G
    C       T A C G       A T G C G     C
    C       + | | |                 T T
    G       G T G C
      G T G        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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