The detailed information of tRNA gene sequence


Sequence ID>WENV170675102
Genome IDLCWZ01006148
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 844
End posion on genome 919
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
catcctgatc
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGGAGTTCGATC
CTCCTAGGCTCCACCA
Downstream region at tRNA end position 
tcggccaggc
Secondary structure (Cloverleaf model)
>WENV170675102	Ala	TGC
                   c      ACCA tcggccaggc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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