The detailed information of tRNA gene sequence


Sequence ID>WENV170675110
Genome IDLCWZ01007145
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 207
End posion on genome 282
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tagacacatg
tRNA gene sequence 
GTGGATGTAGTCAAGTGGTTAAGACACAGGATTGTGGCTCCTGCATGCGTGGGTTCGAAT
CCCATCATCCACCCCA
Downstream region at tRNA end position 
ccattgggat
Secondary structure (Cloverleaf model)
>WENV170675110	His	GTG
                   g      CCCA ccattgggat
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    G       A C T G       G T G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     CATGC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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