The detailed information of tRNA gene sequence


Sequence ID>WENV170675111
Genome IDLCWZ01007145
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 287
End posion on genome 362
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
accccaccat
tRNA gene sequence 
TGGGATATAGCCAAGTCGGTAAGGCAGCGGACTTTGACTCCGTCATGCGCAGGTTCGAGT
CCTGCTATCCCAGCCA
Downstream region at tRNA end position 
ataccgtggc
Secondary structure (Cloverleaf model)
>WENV170675111	Gln	TTG
                   t      GCCA ataccgtggc
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       A C C G       G C A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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