The detailed information of tRNA gene sequence


Sequence ID>WENV170675112
Genome IDLCWZ01007145
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 393
End posion on genome 467
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gccactctac
tRNA gene sequence 
GCGGAAGTGGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGAGTTCGAATC
TCGTCTTCCGCTCCA
Downstream region at tRNA end position 
caatttcatg
Secondary structure (Cloverleaf model)
>WENV170675112	Gly	GCC
                   c      TCCA caatttcatg
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C T C     A
        G A        G      + | | | |     G
      T     C T C G       G C G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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