The detailed information of tRNA gene sequence


Sequence ID>WENV170675120
Genome IDLCWZ01007443
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 93
End posion on genome 169
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccaaacgc
tRNA gene sequence 
GGCCTGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCAGGTCGCCA
Downstream region at tRNA end position 
tttattttta
Secondary structure (Cloverleaf model)
>WENV170675120	Asp	GTC
                   c      GCCA tttattttta
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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