The detailed information of tRNA gene sequence


Sequence ID>WENV170675128
Genome IDLCWZ01007443
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 844
End posion on genome 920
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atataacatt
tRNA gene sequence 
CCGGGTGTAGCGCAGTTTGGTAGCGCACATGGTTTGGGACCATGGGGTCGGGAGTTCGAA
TCTCTCCACCCGGACCA
Downstream region at tRNA end position 
tttatattat
Secondary structure (Cloverleaf model)
>WENV170675128	Pro	TGG
                   t      ACCA tttatattat
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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