The detailed information of tRNA gene sequence


Sequence ID>WENV170675134
Genome IDLCWZ01008362
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 735
End posion on genome 662
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gttaaaagct
tRNA gene sequence 
GGTACCATAGCTCAGTTGGTAGAGCAACGGACTGAAAATCCGTGTGTCCCTGGTTCGATT
CCGGGTGGTACCACgc
Downstream region at tRNA end position 
caaaccacga
Secondary structure (Cloverleaf model)
>WENV170675134	Phe	GAA
                   t      ACgc caaaccacga
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G
                     A - T          T T
                    T     G G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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