The detailed information of tRNA gene sequence


Sequence ID>WENV170675138
Genome IDLCWZ01008378
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 456
End posion on genome 380
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttttttttag
tRNA gene sequence 
GCGGGAATAGCTCAGTTGGCTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAG
TCCCGTTTCCCGCTCCA
Downstream region at tRNA end position 
ttccactttt
Secondary structure (Cloverleaf model)
>WENV170675138	Gly	TCC
                   g      TCCA ttccactttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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