The detailed information of tRNA gene sequence


Sequence ID>WENV170675148
Genome IDLCWZ01009582
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 683
End posion on genome 757
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ggcataatgt
tRNA gene sequence 
TCCAGAGTAGCTCAATGGTGGAGCACCCGGCTGTTAACCGGTAGGTTGGAGGTTCGAGTC
CTCTCTCTGGAGCCA
Downstream region at tRNA end position 
gaaaattgcc
Secondary structure (Cloverleaf model)
>WENV170675148	Asn	GTT
                   t      GCCA gaaaattgcc
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     T C T C C     A
        A A        A      + | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     AGGTT
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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