The detailed information of tRNA gene sequence


Sequence ID>WENV170675150
Genome IDLCWZ01009875
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 730
End posion on genome 654
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcaccaaagt
tRNA gene sequence 
GGGAGCATAGCTCAGCTGGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCGAG
CCCTGTTGCTCCCACCA
Downstream region at tRNA end position 
tcaatgcggc
Secondary structure (Cloverleaf model)
>WENV170675150	Val	TAC
                   t      ACCA tcaatgcggc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G G A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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