The detailed information of tRNA gene sequence


Sequence ID>WENV170675154
Genome IDLCWZ01009875
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 369
End posion on genome 293
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcaccattta
tRNA gene sequence 
GGGCTCATAGCTCAGCAGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
tttttattta
Secondary structure (Cloverleaf model)
>WENV170675154	Ile	GAT
                   a      ACCA tttttattta
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    A       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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