The detailed information of tRNA gene sequence


Sequence ID>WENV170675176
Genome IDLCWZ01011728
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 213
End posion on genome 137
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaagggaata
tRNA gene sequence 
AGGCTCATAGCTCAGCAGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
tttctgtaaa
Secondary structure (Cloverleaf model)
>WENV170675176	Ile	GAT
                   a      ACCA tttctgtaaa
                     A   C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    A       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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