The detailed information of tRNA gene sequence


Sequence ID>WENV170675186
Genome IDLCWZ01012821
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 465
End posion on genome 539
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttaataatgt
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTATTCCCCAGTTCAAATC
TGGGTGCCGCCTCCA
Downstream region at tRNA end position 
aaaattcagt
Secondary structure (Cloverleaf model)
>WENV170675186	Cys	GCA
                   t      TCCA aaaattcagt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     A
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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