The detailed information of tRNA gene sequence


Sequence ID>WENV170675189
Genome IDLCWZ01013026
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 705
End posion on genome 632
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtttgtcgcT
tRNA gene sequence 
GGGCCGATAGATCAGGGGGAGATCGCTACCTTGGCATGGTAGAGGCCGCGGGTTCAAATC
CCGCTCGGTCCATgt
Downstream region at tRNA end position 
tgttttagta
Secondary structure (Cloverleaf model)
>WENV170675189	Ala	GGC
                   T      ATgt tgttttagta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        G A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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