The detailed information of tRNA gene sequence


Sequence ID>WENV170675190
Genome IDLCWZ01013091
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 540
End posion on genome 624
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctatgaaggc
tRNA gene sequence 
GCGAGGGTAGCCAAGCCAGGCCAACGGCGTCGGACTTAAGATCCGATCCCGCAGGGGTCC
GCCGGTTCGAATCCGGCCTCTCGCAttt
Downstream region at tRNA end position 
ttcacttcac
Secondary structure (Cloverleaf model)
>WENV170675190	Leu	TAA
                   c      Attt ttcacttcac
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C G G C C     A
    C C G A        A      | | | | |     G
  A         A C C G       G C C G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCCGCAGGGGTCC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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