The detailed information of tRNA gene sequence


Sequence ID>WENV170675218
Genome IDLCWZ01017635
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 455
End posion on genome 364
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagagctttt
tRNA gene sequence 
GGAGAAGTACTCAAGTAGGCTCAAGAGGACGGTTTGCTAAACCGTTAGGTCGCTTATGCG
GCGCGCGGGTTCGAATCCCGCCTTCTCCGCCA
Downstream region at tRNA end position 
ttggtcaccg
Secondary structure (Cloverleaf model)
>WENV170675218	Ser	GCT
                   t      GCCA ttggtcaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C G C C C     A
    A T G A        A      | | | | |     G
  G         A C T C       G C G G G     C
  G           | | |                 T T
  C         A G A G
    T C A          G     TAGGTCGCTTATGCGGCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK