The detailed information of tRNA gene sequence


Sequence ID>WENV170675220
Genome IDLCWZ01017635
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 264
End posion on genome 188
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attcttatga
tRNA gene sequence 
GGGCCTTTAGCTCAGATGGTTAGAGCATCCGGCTCATAACCGGCAGGTGCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
cattttcctt
Secondary structure (Cloverleaf model)
>WENV170675220	Met	CAT
                   a      ACCA cattttcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      A G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTG
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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