The detailed information of tRNA gene sequence


Sequence ID>WENV170675225
Genome IDLCWZ01018657
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 111
End posion on genome 187
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
catttaaatt
tRNA gene sequence 
CCGGGTGTAGCGCAGTTTGGTAGCGCACATGGTTTGGGACCATGGGGTCGGGAGTTCGAA
TCTCTTCACCCGGACCA
Downstream region at tRNA end position 
ttttttttga
Secondary structure (Cloverleaf model)
>WENV170675225	Pro	TGG
                   t      ACCA ttttttttga
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C T C     A
      T G A        A      + + | | |     G
    T       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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