The detailed information of tRNA gene sequence


Sequence ID>WENV170675229
Genome IDLCWZ01018657
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 479
End posion on genome 554
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ctaccaaagt
tRNA gene sequence 
GGGAGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCGAGC
CCTGTTGCTCCCACCA
Downstream region at tRNA end position 
aacgcggcct
Secondary structure (Cloverleaf model)
>WENV170675229	Val	TAC
                   t      ACCA aacgcggcct
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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