The detailed information of tRNA gene sequence


Sequence ID>WENV170675246
Genome IDLCWZ01020823
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 372
End posion on genome 297
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gccaaaacat
tRNA gene sequence 
TGGGATATAGCCAAGTCGGTAAGGCAGCGGACTTTGACTCCGTCATGCGCAGGTTCGAGT
CCTGCTATCCCAGCCA
Downstream region at tRNA end position 
tacttgaccc
Secondary structure (Cloverleaf model)
>WENV170675246	Gln	TTG
                   t      GCCA tacttgaccc
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       A C C G       G C A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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