The detailed information of tRNA gene sequence


Sequence ID>WENV170675260
Genome IDLCWZ01021801
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 341
End posion on genome 265
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
caaattatgt
tRNA gene sequence 
CCGGGTGTAGCGCAGTTTGGTAGCGCACATGGTTTGGGACCATGGGGCCGGGAGTTCGAA
TCTCTCCACCCGGACCA
Downstream region at tRNA end position 
ttatttgccc
Secondary structure (Cloverleaf model)
>WENV170675260	Pro	TGG
                   t      ACCA ttatttgccc
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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