The detailed information of tRNA gene sequence


Sequence ID>WENV170675300
Genome IDLCWZ01035280
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 121
End posion on genome 46
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ccataatcat
tRNA gene sequence 
TGGGATATAGCCAAGTCGGTAAGGCAGCGGACTTTGACTCCGTCATGCGCAGGTTCGAGT
CCTGCTATCCCAGCCA
Downstream region at tRNA end position 
tacctgaccc
Secondary structure (Cloverleaf model)
>WENV170675300	Gln	TTG
                   t      GCCA tacctgaccc
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       A C C G       G C A G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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