The detailed information of tRNA gene sequence


Sequence ID>WENV170675304
Genome IDLCWZ01037417
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 26
End posion on genome 101
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaggaatcat
tRNA gene sequence 
GGGGGCGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGGAGTTCAAAT
CTCCTCGTCTCCACCA
Downstream region at tRNA end position 
tgaattctta
Secondary structure (Cloverleaf model)
>WENV170675304	Ala	TGC
                   t      ACCA tgaattctta
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T C C T C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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