The detailed information of tRNA gene sequence


Sequence ID>WENV170675342
Genome IDLCWZ01043155
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 243
End posion on genome 159
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
atcaaatttt
tRNA gene sequence 
GGAGGGGTGCCCGAGTGGTTAAAGGGAGCAGACTGTAAATCTGCCGGCGATGCCTACAAA
GGTTCAAATCCTTTCCCCTCCACCA
Downstream region at tRNA end position 
ttatgcggga
Secondary structure (Cloverleaf model)
>WENV170675342	Tyr	GTA
                   t      ACCA ttatgcggga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T T C C     A
      T G A        G      | | | | |     A
    G       G C C C       A A A G G     C
    G         | | |                 T T
    T       A G G G
      T A A        A     CGGCGATGCCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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