The detailed information of tRNA gene sequence


Sequence ID>WENV170675354
Genome IDLCWZ01046121
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 288
End posion on genome 362
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgttgttcct
tRNA gene sequence 
GCCGATGTAGCTCAGGGGTAGAGCGTTTCCTTGGTAAGGAAGAGGCCACGGGTTCAATTC
CCGTCATCGGCTCTA
Downstream region at tRNA end position 
ctgaagaaat
Secondary structure (Cloverleaf model)
>WENV170675354	Thr	GGT
                   t      TCTA ctgaagaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T C G       A C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGCC
                    T + G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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