The detailed information of tRNA gene sequence


Sequence ID>WENV170675382
Genome IDLCWZ01057228
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 162
End posion on genome 86
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttttgatgg
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGGAGGCCGTAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
ataatttatg
Secondary structure (Cloverleaf model)
>WENV170675382	Met	CAT
                   g      ACCA ataatttatg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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