The detailed information of tRNA gene sequence


Sequence ID>WENV170675389
Genome IDLCWZ01058439
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 103
End posion on genome 177
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aacctactgc
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGCTAGAGCGCTTGGCTGGCAGCCAAGAGGCCACCGGTTCGAA
TCCGGTATTCTCCACtt
Downstream region at tRNA end position 
aaaacccgga
Secondary structure (Cloverleaf model)
>WENV170675389	Ala	GGC
                   c      ACtt aaaacccgga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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