The detailed information of tRNA gene sequence


Sequence ID>WENV170675428
Genome IDLCWZ01070465
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 308
End posion on genome 233
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
caccatttaa
tRNA gene sequence 
TGGCGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCGAGC
CCTGTTGCGCCCACCA
Downstream region at tRNA end position 
tttaggcccg
Secondary structure (Cloverleaf model)
>WENV170675428	Val	TAC
                   a      ACCA tttaggcccg
                     T   C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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