The detailed information of tRNA gene sequence


Sequence ID>WENV170675429
Genome IDLCWZ01070465
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 228
End posion on genome 152
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaccattta
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
tttcaaactt
Secondary structure (Cloverleaf model)
>WENV170675429	Asp	GTC
                   a      GCCA tttcaaactt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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