The detailed information of tRNA gene sequence


Sequence ID>WENV170675433
Genome IDLCWZ01071815
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 179
End posion on genome 267
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccagaaaatt
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGCAGACGCACAGGACTTAAAATCCTGCGATCCTACAAGATCG
TACCGGTTCGATTCCGGTCTTCGGCACCA
Downstream region at tRNA end position 
ttttcgaata
Secondary structure (Cloverleaf model)
>WENV170675433	Leu	TAA
                   t      ACCA ttttcgaata
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     T G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       A C C G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGATCCTACAAGATCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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