The detailed information of tRNA gene sequence


Sequence ID>WENV170675468
Genome IDLCWZ01085566
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 164
End posion on genome 239
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
actatgattg
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGCCAGCGGTTCGAAT
CCGCTTACCTCCACCA
Downstream region at tRNA end position 
gaaaaatttt
Secondary structure (Cloverleaf model)
>WENV170675468	Ala	TGC
                   g      ACCA gaaaaatttt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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