The detailed information of tRNA gene sequence


Sequence ID>WENV170675478
Genome IDLCWZ01089031
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 110
End posion on genome 34
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
accgggcaaa
tRNA gene sequence 
GGCCCCGTGGCTCAACAGGATAGAGCGGCCCCCTCCTAAGGGGCAGGTTGCAGGTTCGAA
TCCTGCCGGGGTCACCA
Downstream region at tRNA end position 
gattgcaaaa
Secondary structure (Cloverleaf model)
>WENV170675478	Arg	CCT
                   a      ACCA gattgcaaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C A A        G      | | | | |     G
    A       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTT
                    G - C
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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