The detailed information of tRNA gene sequence


Sequence ID>WENV170675491
Genome IDLCWZ01093036
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 133
End posion on genome 209
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
attcaatatg
tRNA gene sequence 
GTGGATGTAGCTCAGTTGGCTAGAGCGCAGGATTGTGGCTCCTGAGGCCGTGGGTTCAAG
CCCCATCATCCACCCCA
Downstream region at tRNA end position 
ttatattttc
Secondary structure (Cloverleaf model)
>WENV170675491	His	GTG
                   g      CCCA ttatattttc
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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