The detailed information of tRNA gene sequence


Sequence ID>WENV170675500
Genome IDLCWZ01096593
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 171
End posion on genome 245
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cttatcctga
tRNA gene sequence 
TCCAGAGTAGCTCAATGGTAGAGCATCCGGCTGTTAACCGGCAGGTTGGAGGTTCGAGTC
CTCTCTCTGGAGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170675500	Asn	GTT
                   a      GCCA nnnnnnnnnn
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     T C T C C     A
        A A        A      + | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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