The detailed information of tRNA gene sequence


Sequence ID>WENV170675506
Genome IDLCWZ01099939
Search identical group
Phylum/Class[LCWZ] anaerobic digester metagenome; anaerobic digester run at haloalkaline conditions (pH=10; 2.0M Na+) with Spirulina as substrate
Species
Start position on genome 219
End posion on genome 145
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taatatttta
tRNA gene sequence 
GCTCCGGTAGTGTAGTCCGGCCAATCATTTCGGCCTTTCGAGCCGAAGACTCGGGTTCGA
ATCCCGGCCGGAGCAtta
Downstream region at tRNA end position 
taatcataag
Secondary structure (Cloverleaf model)
>WENV170675506	Glu	TTC
                   a      Atta taatcataag
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      + | | | |     G
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        T     AGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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