The detailed information of tRNA gene sequence


Sequence ID>WENV170675620
Genome IDLDZP01000146
Search identical group
Phylum/Class[LDZP] terrestrial metagenome; oil reservoir sample I1
Species
Start position on genome 3279
End posion on genome 3203
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgaaggaaa
tRNA gene sequence 
GGCTACGTAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCCCCTGTTCAAA
TCAGGGCGTAGCCACCA
Downstream region at tRNA end position 
catcagcctt
Secondary structure (Cloverleaf model)
>WENV170675620	Met	CAT
                   a      ACCA catcagcctt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     G G G A C     A
      C G A        A      | | | | |     A
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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