The detailed information of tRNA gene sequence


Sequence ID>WENV170675648
Genome IDLDZP01000179
Search identical group
Phylum/Class[LDZP] terrestrial metagenome; oil reservoir sample I1
Species
Start position on genome 27522
End posion on genome 27615
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaccaacgt
tRNA gene sequence 
GGAGAAGTACCCAAGATGGTGAAGGGGCGGTCCTGCTAAGACTGTAGGTCGGGGATAACC
CGGCGCGAGGGTTCGAGTCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
ttttattatg
Secondary structure (Cloverleaf model)
>WENV170675648	Ser	GCT
                   t      GCCA ttttattatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A G A        A      | | | | |     G
    T       A C C C       G A G G G     C
    G         | | |                 T T
    G       A G G G
      T G A        G     TAGGTCGGGGATAACCCGGCGC
                    C - G
                    G + T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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