The detailed information of tRNA gene sequence


Sequence ID>WENV170679671
Genome IDLFCJ01000116
Search identical group
Phylum/Class[LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1
Species
Start position on genome 24379
End posion on genome 24291
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatacactgT
tRNA gene sequence 
GTCGGGGTGGCAGAGTGGCTTAACGCGATGGCTTGCTAAGCCATTGGGCTTCTAAAGCCC
GCCCGGGTTCGAATCCCGGCCCCGGCGTgt
Downstream region at tRNA end position 
ttctatctaa
Secondary structure (Cloverleaf model)
>WENV170679671	Ser	GCT
                   T      GTgt ttctatctaa
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C C G G G     C
    G           | |                 T T
    C       A C G C
      T T A        G     TGGGCTTCTAAAGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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