The detailed information of tRNA gene sequence


Sequence ID>WENV170679712
Genome IDLFCJ01000181
Search identical group
Phylum/Class[LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1
Species
Start position on genome 33690
End posion on genome 33780
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatcagtcaT
tRNA gene sequence 
GCCGGAGTGACTGAGCGGCTAAAGGTGCCAGCCTGGAAAGCTGGTGGGCCATTGCGCGCC
CTCCTGGGTTCGAATCCCAGCTCCGGCGACt
Downstream region at tRNA end position 
tttactagtt
Secondary structure (Cloverleaf model)
>WENV170679712	Ser	GGA
                   T      GACt tttactagtt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G T C A       C T G G G     C
    G         + | |                 T T
    C       A G G T
      T A A        G     TGGGCCATTGCGCGCCCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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