The detailed information of tRNA gene sequence


Sequence ID>WENV170679719
Genome IDLFCJ01000190
Search identical group
Phylum/Class[LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1
Species
Start position on genome 27044
End posion on genome 27118
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttttctaga
tRNA gene sequence 
GCGGAGCTAGTGTAGTCTGGCCCATCATGATACCCTGTCACGGTATCGACGCGGGTTCAA
ATCCCGCGCTCCGCGttt
Downstream region at tRNA end position 
taacgttttt
Secondary structure (Cloverleaf model)
>WENV170679719	Asp	GTC
                   a      Gttt taacgttttt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C G C C C     A
    C T G A        A      | | | | |     A
  T         T G T G       G C G G G     C
  G           | | +                 T T
  G         T C A T
    C C C A        G     CGAC
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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