The detailed information of tRNA gene sequence


Sequence ID>WENV170679815
Genome IDLFCJ01000634
Search identical group
Phylum/Class[LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1
Species
Start position on genome 11614
End posion on genome 11540
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aactattacc
tRNA gene sequence 
GCCTCGTTGGCTCAGCCTGGCTAGAGCGGCTCCCTCGTAAGGAGCAGGTCCCGGGTTCAA
ATCCCGGACGGGGCTttt
Downstream region at tRNA end position 
ctgtataaaa
Secondary structure (Cloverleaf model)
>WENV170679815	Thr	CGT
                   c      Tttt ctgtataaaa
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     T - A          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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