The detailed information of tRNA gene sequence


Sequence ID>WENV170680178
Genome IDLFCJ01005234
Search identical group
Phylum/Class[LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1
Species
Start position on genome 2189
End posion on genome 2260
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aaacgatcgc
tRNA gene sequence 
GGGCTCGTAGATCAGCGGTAGATCGCTTCCTTCGCAAGGAAGAGGCCCTGGGTTCAAATC
CCAGCGAGTCCAtcg
Downstream region at tRNA end position 
aagcgagttt
Secondary structure (Cloverleaf model)
>WENV170680178	Ala	CGC
                   c      Atcg aagcgagttt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C C C     A
        G A        A      | | | | |     A
      C     C T A G       C T G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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